The rule seems clear, as I interpret "Skimmers do not block LOS" to mean that they can not obscure the target in any way as they are incapable of blocking LOS in any capacty!
The skimmer LOS thing is all shades of slowed in my opinion. Consider the following scenarios:
1. You can shoot a target that you can draw LOS to. Skimmers do not block LOS. So, anyone else find it silly that you can draw LOS to a vehicle that can't block LOS. - So it is invisible for the purposes of targeting guys behind it, but it is visible for being targeted itself.
Logic might dictate that the model can't be invisible and visible at the same time, so since the specific rules (does not block LOS) trumps the general ruleset, then one might reason that skimmers can not be shot! Woo!
1a. Skimmers don't block LOS... so, can embarked passengers be shot? There might be an arguement that the embarked passengers are "off the table", and therefore, can not be shot, even if the skimmer doesn't block LOS to them... however, at the same time, embarked passengers can use vehicle firepoints, so they must be on the table in some form. Therefore, it stands to reason that embarked models on skimmers may be shot at, since their vehicle does not block LOS to them, but may not be targeted, since there is no rule for targeting an embarked unit... This might cause further confusion, as this unit -may be seen-, and might be fired upon if a unit fails its target priority check to shoot at another, further away unit, and is therefore FORCED by the rules to target these jerks in the invisible flying taxi.
I fully do not endorse the above viewpoints, it is only there for comedic effect.
2. Skimmers only block LOS if they are wrecked, or if they are immobilized. This makes sense, since a destroyed vehicle is a wreck, and wrecks don't have subtype "skimmer". The other line causes a problem though, since I don't have my Tau codex handy, IIRC, landed skimmers still don't block LOS because they aren't destroyed.