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I think the best faction to symbolise malal followrs would be GK. Having ant-daemon daemon weapons and such but how do I explain who or what the inquisitors or inqusitorial warbands are?

Heresiarchs and heretics, of course!

EDIT: By which I mean cultists.

Malal is not anti-daemon, he's just anti-Chaos, because he's a rebellious teenager who wants to watch the world burn...

... by using his own daemons and Chaos Cultists to feed his anti-Chaos army.

 Psienesis wrote:
Malal is not anti-daemon, he's just anti-Chaos, because he's a rebellious teenager who wants to watch the world burn...

... by using his own daemons and Chaos Cultists to feed his anti-Chaos army.

Being fair to them, they do hate each other for being chaos...

Yes, but he is akin to Necoho, the Chaos God of Atheism. Just one of those strange Chaotic paradoxes.

It's not a paradox. It's just like a case of deific misanthropy or anarchism.

Malal has no armies, they would chop each other up!

 Psienesis wrote:
Malal is not anti-daemon, he's just anti-Chaos, because he's a rebellious teenager who wants to watch the world burn...

... by using his own daemons and Chaos Cultists to feed his anti-Chaos army.

Truly fighting fire with fire.

Perfect, so can anyone direct me to a guide on how to paint my GK as malal followers I know I need black and white but a bit more jnfo please.

I do believe that black and white, often in a checkered pattern, was his sacred colors/pattern when Malal actually existed in the game. I don't remember off-hand if that's any different for Malice.

Well the Sons of Malice use a black and white quartered/chequered scheme. Their patron is Malice, who I believe is generally regarded as being Malal.

As others have said, Malal isn't very anti-daemon, and he was never know for a large number of sorcerers following him, so I think the Grey Knights would be a poor choice.
I'd go with the Dark Angels because they've got some Chaos fighting rules like Inner Circle and Bane of the Traitor, and would be a nicer explanation than whatever you could cook up to explain some random chapter kitted out with Force Weapons and Storm Bolters, I think.