For GEQ sized arms, you'll probably want 1mm magnets with a strength of N35. You will also want to get a 1mm drill bit.
Cheapest place to buy them is Ebay, in all honesty.
The best trick I have for installing magnets is to drill the hole in the joint, test fit the magnet and make sure the surface is flush, apply a dab of superglue and then use a whole stack of magnets to place the magnet in the hole. Let the glue set for a couple of minutes and then drill the matching hole in the other joint. Place a dab of superglue in the new hole. Use the arm and the stack of magnets to place the magnet in the second joint. Let the glue set and then pull off the excess magnets. Doing it this way will make sure your magnet polarities are correct.
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