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.... do the silent siter hood also known as the sisters of silence, still exist in the 40k universe (as of present.)

We don't know. Currently, there is nothing saying what happened with them. A popular fan theory is that they help with the Black Ships, though.

I recall a user here claiming that a Forgeworld employee hinted that they'll feature in an upcoming FW book. Though if that'll say if they exist in the 41st millenium, we don't yet know.

another question: if the sisters were disbanded, what would happen to their armour? would they keep it? would it be melted down? stored in a vault? abandoned?

Troike wrote:A popular fan theory is that they help with the Black Ships, though.

This would be contradicted by GW's own material about Black Ships and who guards or has access to them.

A "problem" is that the core studio itself does not really acknowledge the Sisters of Silence ever existed - they were an invention of a few Black Library authors and have yet to be mentioned in a single core GW product, and as we know from Gav's blog, GW sometimes does adopt ideas from various novels, but they also simply ignore what doesn't fit into their own vision. Perhaps their stance on the SoS will change in time, but given that the Sisters of Silence are somewhat close to the Sisters of Battle, it could also be that they do not want to challenge the latter's uniqueness with a second army of women in power armour who also go by the name of "Sisterhood". That would be kind of like introducing a new all-male army of heavily armoured "Star Marines".

Of course anyone could come up with their own ideas for why the Sisters of Silence might still be around in M41 or what they would do for the Imperium - this is the other side of GW's "no canon" policy, and I have heard of a few fan-projects regarding this faction. If you're interested, here is a PDF that was written for FFG's Dark Heresy RPG, and it features a few bits of fluff in the back. Perhaps it may serve as inspiration?

It would likely necessitate to discard certain elements of GW's own material, though. Aside from the Black Ships background, there is also the bit about Nulls being extremely rare (see the background on Dorian Black for example), and the ones that actually are found and recovered alive being funnelled into the care of the Inquisition and the Assassinorum, the latter using them to train Culexus Assassins.
Myself, I'm still somewhat unsure whether I should acknowledge them at all, but assuming they did exist, I would not be surprised if their order was disbanded either following the Siege of Terra and the affiliated casualties, or later when the Imperium's ability to detect Nulls dropped below a level where their order could be reliably supplied with a sufficient number of new recruits, ultimately leading to the decision that those Nulls would be of more use in more specialised positions. This would at least tie in with the current studio material.

the shrouded lord wrote:another question: if the sisters were disbanded, what would happen to their armour? would they keep it? would it be melted down? stored in a vault? abandoned?

I don't think anyone can truly answer this, but my theory would be storage in a vault and then forgotten, simply because it'd fit to how the Imperium deals with things from the past. Melting it down would simultaneously seem like a waste (the armour plating is just one of several components that make up the suit, and it is the most crude) as well as unusually efficient (the Imperium, recycling stuff?). Surviving members would probably keep their armour even in service of another organisation such as the Inquisition, into which they could have been absorbed.

 the shrouded lord wrote:
another question: if the sisters were disbanded, what would happen to their armour? would they keep it? would it be melted down? stored in a vault? abandoned?

If they'd be disbanded for whatever reason, then I guess that they'd have to give it back? As for what the Imperium would do with it, not sure. I guess they'd want to hold on to it, since it is power armour. Depends on the circumstances, I suppose. Honestly, I don't want to make such an assumption without any information to go off of.

If you need to know for some fluff you're writing, then it's perfectly concievable that some survived somewhere, stored where nobody found it for quite some time.

 Lynata wrote:
but given that the Sisters of Silence are somewhat close to the Sisters of Battle, it could also be that they do not want to challenge the latter's uniqueness with a second army of women in power armour who also go by the name of "Sisterhood". That would be kind of like introducing a new all-male army of heavily armoured "Star Marines".

That's feasible, I think. Personally I think that the two only work when seperated by time periods. They'd be awkard to have co-existing in the same time period.

Basically not known and GW hasn't made up their minds.

I would love SoS models to have alongside my Adeptus Custodes squad guarding my Emperor model.