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Can they make multiple jumps if they are selected more than once in the shooting phase?

Looks that way.
It's rad that the Autarch now gets all that special stuff too, since the rules are bound by the gear and not just by the unit.

-Matt

Matt, Flickerjump is not bound to the wargear, it is bound to the Spider unit. An Autarch that's part of the unit will be able to Flickerjump with the unit, but an Autarch with a warp jump generator that is not part of a Warp Spider unit will not be able to Flickerjump. If Flickerjump was part of the wargear, then an Autarch would be able to join a unit of Wraithguard and let them Flickerjump too.

My bad, I thought the flicker jump was in the giant paragraph in the back of the book.
Oh well.. Thought it would be fun to run an Autarch with a fusion gun jumping all around.

That would be very cool. The side effect of him allowing any unit he joined to Flickerjump would be.... not so cool, haha.

Can an autarch with a warp generator join a unit of warp spiders and flickjump with them? It just says "a unit with this special rule" and doesn't specify that they all need to have it? I'm not sure, looking for opinions.

Yes, That was stated in the second and third posts of this thread. An Autarch in a Warp Spider unit can Flickerjump with them.